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Fish Physiology and Genomics


Introduction
Regulations associated with threatened and endangered fish species are now primary influences on land and water use in Idaho. Water requirements for these species take precedent over all other water uses. However, recent studies have shown that key fish species can flourish in aquatic environments that are outside conventional definitions of “optimal.” Understanding the mechanisms of energy partitioning in fish is fundamental to understanding how fish adapt to various environments, the evolution of key physiological innovations in the vertebrates at the cellular /molecular level, and how land and water use in western states can most wisely be managed while maintaining or enhancing protected native fish populations.


Research Plan
The partitioning of food energy to maintenance functions, growth, and reproduction is a central paradigm in animal physiology. Significant questions pertaining to partitioning of energy remain unanswered, specifically the fundamental mechanisms of energy regulation and how fish respond to environmental cues. Two complementary teleost fish models will be utilized: the zebrafish and the rainbow trout. The zebrafish is a major species in regulatory biology due to its experimental tractability and the availability of genomics tools allowing rapid identification of changes in expression. The rainbow trout has been the subject of numerous ecological, physiological, and nutritional studies showing responsiveness to changes in nutritional status and photoperiod. Our project will focus on growth, nutrient partitioning, regulation of cellular lipid profiles, and communication between the growth and reproductive axes of fish utilizing the combined approaches of investigation of specific physiological and metabolic pathways, and a comparative genomic approach. Specific research questions are:

  1. How are structural lipids, energy pathways, and signaling lipids regulated in response to energy intake, photoperiod, and maturation?

  2. Which genes are central to regulatory processes?

  3. What links and pathways exist between environment, endocrine regulation, and nutrient partitioning?

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Participants

Faculty members' names link directly to their websites.

Faculty

Specialty

Affiliation

Dr. Ron Hardy

(Team Leader)

  • Alternative feed ingredients for fish meal and fish oil for use in salmon and trout feeds

  • Molecular genetics in relation to somatic growth, nutrient partitioning, and effects of diet on immune function

  • Ornamental fish production using geothermal water resources, including zebrafish as an ornamental species and as a research species for molecular studies

University of Idaho, Hagerman Fish Culture Experiment Station

Dr. Rod Hill

  • Leptin – insulin interaction – Implications for energy expenditure and production efficiency

  • The Insulin-Like Growth Factor Axis in Growth Efficiency

University of Idaho,
Animal & Veterinary Sciences

Dr. Gordon Murdoch

  • Animal physiology

  • Molecular biology

University of Idaho,
Animal & Veterinary Sciences

Dr. Madison Powell

  • Applied population genetics

  • Chromosomal evolution

  • Commercial aquaculture

  • Cytogenetics

  • Molecular systematics

University of Idaho,
Animal & Veterinary Sciences

Dr. Barrie Robison

  • Genetic architecture of complex traits

  • The evolution of locally adaptive phenotypes

  • Genomic analysis of behavioral variation in fish

University of Idaho,
Biological Sciences

Dr. Ken Rodnick

  • Comparative Biochemistry and Physiology of Striated Muscle

  • Comparative Physiology

  • Adaptational Biology

Idaho State University,
Biological Sciences

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