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Research Experience for Undergraduates
Kathleen Kavanagh
Forest Resources
208/885-2552
katyk@uidaho.edu
Forest Canopy Transpiration:  In many ecosystems a significant portion of incoming precipitation is transpired by the dominant vegetation. The northwestern U.S.A. is unique in that soil moisture recharge occurs during the winter when forest canopy transpiration is limited by temperature and humidity.  However, climate change models predict a shift in the seasonality of precipitation in this region along with milder temperatures and potential tree species shifts. These changes may lead to a shift in the magnitude of transpiration from the forests carpeting the mountainous watersheds of the west.  This shift in the water cycle could result in a decline in water yield from forested watersheds. We have data on the transpiration flux rates from forest canopies across a range of tree species, forest ages, climate conditions and slope positions. The REU student will work on parameterizing existing process models such as Biome BGC which will allow us to run several climate change scenarios to forecast how changes in precipitation patterns may impact transpiration fluxes from forest canopies. This work will be done primarily in the lab on a computer although there will be opportunities to work at our field sites where we are measuring forest transpiration and other parameters.

 

 

John Marshall
Forest Resources
208-885-6995
jdm@uidaho.edu
Net Primary Productivity of an Instrumented Forest in Northern Idaho:  Forest canopies exchange water vapor for carbon dioxide through sub-millimeter-scale pores in their leaves. The exchange ratio determines the rate of photosynthesis and therefore sets the ultimate limit on productivity. Understanding the controls over this ratio is critical to predict and explain the relations between water yield and wood production. MCEW comprises an intensively-instrumented set of nested watersheds, managed under a range of silvicultural regimes. Preliminary research at the MCEW has focused on the timing and distribution of water yields, and on the sediment load in the streams. Little work has been focused on estimates of forest production, which represents a significant component of the total carbon cycle on the site. The only work so far has been to install litter traps along elevation transects within each of the study watersheds. Litter traps provide an estimate of the carbon flux through the canopy as leaves are produced and shed. The objective of this project is to combine the litter trap data with measurements of biomass accumulation in the trees and thus estimate net primary production aboveground. The REU student will learn how to measure the components of net primary production by combining standard forestry techniques (variable radius plots) for the overstory trees, ecological techniques for estimating understory production (fixed radius plots and allometric equations), and will learn to process the litter data. The student will work closely with a team of other REU students, graduate students, post-doctoral fellows, and faculty members in the investigation of the coupling of carbon and water fluxes at MCEW. The project will be conducted at a range of scales and intensities, from single points to analyses of whole transects, and from bulk productivity to species-specific estimates. The students will also assist and interact with other interdisciplinary scientists who study water fluxes and other aspects of ecohydrology.
 

Timothy Link
Forest Resources
208/885-9465
tlink@uidaho.edu

Ecohydrology of Heterogeneous Forest Canopies:  Advancing Scientific Understanding to Develop Innovative Management Approaches to Sustain Water Supplies:  In the interior Pacific Northwest, many municipal water supplies originate as snow in forested upland watersheds.  Many of these areas are located in the winter rain-snow transition zone and have accumulated large fuel loads as a result of historical fire suppression.  These areas are susceptible to effects of climate change on snowcover and runoff processes and are at risk of catastrophic wildfire.  As a result, there is a need to develop innovative, science-based management approaches to sustain water flow and quality while reducing the risk of wildland fire hazards.  Most management approaches for these areas focus on even canopy thinning or removal, however recent research has indicated that the creation of a discontinuous canopy structure may be a more effective means to sustain water resources.  A large volume of knowledge exists on the mass and energy dynamics of homogeneous canopies, but little is known about the fine-scale dynamics in heterogeneous forests. The objectives of this project are to determine the patterns and dynamics of canopy rainfall interception soil water content across forest canopy discontinuities. The REU student will learn how to measure canopy and soil hydrologic properties, and to install and operate hydrometeorological and soil water content sensors. The REU undergraduate will become an integral member of a team of other REUs, graduate students, and faculty conducting investigations in the Palouse Basin focused on water resources sustainability. The student will also assist and interact with other interdisciplinary scientists who are studying other aspects of the system, to gain breadth as well as depth in their REU program.

 

 

Jan Boll
Biological and Agricultural Engineering
208-885-7324
jboll@uidaho.edu

A Program in Hydrology and Water Quality to Support and Evaluate Watershed RestorationWe educate future hydrology and water quality experts as we improve our understanding of water and pollutant transport in Pacific Northwest watersheds. We study the watershed of Paradise Creek (adjacent to UI campus) as an outdoor laboratory for teaching and research on hydrology and water quality issues for both students and the public. Our research questions are: Do we understand the natural system well enough to formulate the theoretical equations describing the natural system? Can sophisticated models be field validated? Specific objectives include: (1) establish a field data collection program for developing models and evaluating watershed restoration activities; (2) develop a family of regionally applicable GIS-based distributed water and contaminant transport models; (3) determine the level of complexity required to evaluate watershed restoration activities using uncertainty analysis in model predictions and existing models; and, (4) assist government agencies in evaluating Best Management Practices and performing risk analysis under different climate and land use change scenarios. These objectives are complemented by our focus on community outreach and integration of education with data collection in the watershed. The REU undergraduates will assist in implementation of an existing hydrologic and/or water quality model using Paradise Creek data, design (and some execution) of a field data collection program for GIS database construction, and/or investigating the hydrologic connectivity to determine how landscape elements are connected to Paradise Creek.

 

Christopher Peery
Fish and Wildlife
208/885-7223
cpeery@uidaho.edu

Evaluation of a restored stream in Northern Idaho:  In this project we partner with the Coeur d’Alene Tribe to evaluate the ongoing restoration of Benewah Creek, a third order stream in Northern Idaho that drains into Coeur d’Alene Lake, and ultimately into the Columbia River. Stream impacts from diversions, land-use practices, development, etc. have interrupted natural ecological processes within most watersheds, most notably annual flow patterns, temperatures and interactions with groundwater.  Significant effort and funding is being directed towards restoring degraded rivers and streams in the West. However, evaluation of these restoration efforts has received less attention. The REU student will measure key habitat characteristics of restored and unrestored stream segments; measure fish and macroinvertebrate abundances in restored and unrestored stream segments, and summarize data and evaluate effectiveness of restoration methods. By the end of the project, s/he will acquire an understanding of scientific methods and experience collecting field data using a variety of methods including data recorders, stream survey methods, snorkel and electrofishing surveys, and benthic invertebrate sampling.

 

 

Robert Mahler
PSES
208/885-
7025
bmahler@uidaho.edu 

Biological assessment of the Clear Creek watershed in Idaho County, Idaho: The Clear Creek watershed, located near Kooskia, Idaho, is 24,421 hectares in size, with land use dominated by forestry and agriculture. There is a hatchery on the steam segment which is an important water body for migrating fish. The student will use macroinvertebrates as the assessment tool. An integral part of this research project will include close work with Dr. Mahler, and an experienced graduate student. The research experience will consist of both field measurements and sampling, and consequent laboratory identification of collected materials. The student will also be exposed to data compilation and analysis.

 

 

Matthew Morra
PSES
208/885-6315
mmorra@uidaho.edu

Wetlands as Sinks for Metals in Mining-contaminated Coeur d’Alene Basin Soils:  Mining activities within the Coeur d’Alene (CDA) Basin have resulted in large areas of metal contamination far beyond the designated Bunker Hill Mining and Metallurgical Superfund Site, contaminating the CDA River and CDA Lake. It will be impossible to remove and dispose of contaminated sediments within the CDA Basin and Lake CDA, and thus management decisions that protect the environment and human health are required. Our objective is to determine the potential for ponds located within the floodplain of the CDA River to act as a sink for Cd, Zn, As, Cu, and Pb mobilized during seasonal changes in surrounding soils. We will achieve this goal by characterizing changes in soluble metal concentrations in ponds located in the contaminated floodplain.  Total metal concentrations in the sediment of contaminated ponds within the Coeur d’Alene Basin will be determined. Pond waters will be secured on a monthly basis and total metal concentrations measured.  We will ultimately 1) determine if wetlands in metal-contaminated areas can be used as contaminant sinks, 2) delineate spatial and temporal variables that control the extent of metal sequestration, and 3) elucidate the responsible biogeochemical processes.  Expectations include a willingness to work in both the field and laboratory, a familiarity and appreciation for environmental chemistry, and a strong motivation to conduct publishable research.

Frank Wilhelm
Fish and Wildlife
208/885-7218
fwilhelm@uidaho.edu
Improving surface water quality by reducing algal blooms:  The goal of our project is to examine the mechanism(s) by which long distance circulation prevents or mitigates the occurrence of algal blooms in surface waters.  Many of these blooms produce toxins that can kill humans and livestock.  Because of anthropogenic activities, the occurrence of algal blooms is increasing in water bodies world-wide.  Our project will use a hypothesis-driven approach to examine several competing hypotheses to explain how water circulation prevents or mitigates blooms.  We will partition off large areas of a lake in northern Idaho to form experimental units that will be manipulated to test these hypotheses.  Students can expect exposure to state-of-the-art technology in lake management, interactions with university researchers, graduate students, industry professionals, tribal and state agency staff, as well as the public.  The project will entail both field and laboratory work.  Expectations include: enthusiasm and willingness to stretch your mind, driver's license, experience with small boats and outboard motors, willingness to work under variable weather conditions; some experience in limnology or aquatic ecology helpful.
   
Susan Childers
Geological Sciences
208/885-4289
childers@uidaho.edu

Biological and Geochemical Influences on Arsenic Speciation in a Geothermal Environment: The goal of this project is to determine the impact of biological and geochemical processes on arsenic oxidation in surface waters of geothermal origin. The project incorporates procedures routinely used by geochemists, microbiologists, and molecular ecologists. Specifically, geochemical parameters including pH, temperature and oxygenation status are monitored in the field and the effect on arsenic oxidation will be modeled.  Microorganisms involved in the biological oxidation of arsenic will be collected and characterized, and molecular techniques will be employed to assess the significance of the microorganisms in environments undergoing arsenic oxidation. An REU undergraduate will be involved in a highly interdisciplinary project and will learn and perform skills applied in both physical and biological disciplines.

 

Barbara Williams
Bio & Ag Engr.
208/885-
9436
barbwill@uidaho.edu 

Biomineralization within soil to mitigate seismic induced liquefaction:  Under this project, a team of Idaho faculty researchers with expertise in groundwater transport, geotechnical engineering, and microbiology will develop a technique to inject microbes into soil and induce them to produce minerals to help protect the soil against liquefaction (becoming quicksand) during a seismic event. This objective is complemented by our commitment to incorporating undergraduate researchers and under-represented students such as Native Americans in our research programs. The REU student will work with Dr. Barbara Williams, an MS student, and research support scientist, Dr. Robin Nimmer, to perform column experiments of microbe transport in soil, including destructive sampling of depth distributions of the microbes and the desired reaction products. The student will gain experience in sample preparation, porous media flow, practical fluid mechanics, programming of data-loggers, maintaining high data quality, interpretation of test results, and lab teamwork/communication skills. This lab team maintains their notes on a wiki (online shared-access web page), an exciting and state-of-the art means of facilitating documentation and communication.

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